BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A05LP1|AL426447
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1470 0.0
3x_Contig1530 829 0.0
3x_Contig18 492 e-139
>3x_Contig1461
Length = 5478
Score = 1470 bits (741), Expect = 0.0
Identities = 782/795 (98%), Gaps = 1/795 (0%)
Strand = Plus / Minus
Query: 1 ggttgatcctgccagtagtcatatgcttgtctcaaagattaagccatgcatgtctaagta 60
|||||||| ||| |||||| |||||||||| | ||||||||||| |||||||| ||||||
Sbjct: 2031 ggttgatcttgcgagtagttatatgcttgtataaaagattaagcaatgcatgtataagta 1972
Query: 61 taagcaatttatacagtgaaatgcgaatggctcattaaatcagttatcgtttatttgata 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1971 taagcaatttatacagtgaaatgcgaatgggtcattaaatcagttatcgtttatttgata 1912
Query: 121 gttcctttactacatggatatctgtggtaattctagagctaatacatgcttaaaatctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 gttcctttactacatggatatctgtggtaattctagagctaatacatgcttaaaatctcg 1852
Query: 181 accctttggaagagatgtatttattagataaaaaatcaatgtcttcggactccttgatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 accctttggaagagatgtatttattagataaaaaatcaatgtcttcggactccttgatga 1792
Query: 241 ttcataataacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 ttcataataacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctg 1732
Query: 301 ccctatcaactttcgatggtaggatagtggcctaccatggtttcaacgggtaacggggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 ccctatcaactttcgatggtaggatagtggcctaccatggtttcaacgggtaacggggaa 1672
Query: 361 taagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 taagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagc 1612
Query: 421 aggcgcgcaaattacccaatcctaattcagggaggtagtgacaataaataacgatacagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 aggcgcgcaaattacccaatcctaattcagggaggtagtgacaataaataacgatacagg 1552
Query: 481 gcccattcgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 gcccattcgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaact 1492
Query: 541 ggagggcaagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 ggagggcaagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaag 1432
Query: 601 ttgttgcagttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 ttgttgcagttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttat 1372
Query: 661 gtcgcgcactggttttcaaccggatctttccttctggctaacctgtactccttgtgggtg 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 gtcgcgcactggttatcaaccggatctttccttctggctaacctgtactccttgtgggtg 1312
Query: 721 caggcgaaccaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaa-stcg 779
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1311 caggcgaaccattacttttactttgaaaaaattagagtgttcaaagcaggcgaaagctcg 1252
Query: 780 aatatattagcatgg 794
|||||||||||||||
Sbjct: 1251 aatatattagcatgg 1237
>3x_Contig1530
Length = 6216
Score = 829 bits (418), Expect = 0.0
Identities = 426/428 (99%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 368 tcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcg 73
Query: 428 caaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggcccatt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 caaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggcccatt 133
Query: 488 cgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggagggc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggagggc 193
Query: 548 aagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgttgc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgttgc 253
Query: 608 agttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcgcgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcgcgc 313
Query: 668 actggttttcaaccggatctttccttctggctaacctgtactccttgtgggtgcaggcga 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 actggttttcaaccggatctttccttctggctaacctgtactccttgtgggtgcaggcga 373
Query: 728 accaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaa-stcgaatatat 786
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 374 accaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaagctcgaatatat 433
Query: 787 tagcatgg 794
||||||||
Sbjct: 434 tagcatgg 441
>3x_Contig18
Length = 1116
Score = 492 bits (248), Expect = e-139
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 70 tatacagtgaaatgcgaatggctcattaaatcagttatcgtttatttgatagttccttta 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tatacagtgaaatgcgaatggctcattaaatcagttatcgtttatttgatagttccttta 98
Query: 130 ctacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttgg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ctacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttgg 158
Query: 190 aagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattcataata 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattcataata 218
Query: 250 acttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatcaa 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatcaa 278
Query: 310 ctttcgat 317
||||||||
Sbjct: 279 ctttcgat 286
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4551
Number of Sequences: 1807
Number of extensions: 4551
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 3
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)